3D structure

PDB id
1K73 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit
Experimental method
X-RAY DIFFRACTION
Resolution
3.01 Å

Loop

Sequence
GGUAAG*CGAAAC
Length
12 nucleotides
Bulged bases
1K73|1|A|A|2800
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_1K73_095 not in the Motif Atlas
Homologous match to IL_4V9F_096
Geometric discrepancy: 0.0261
The information below is about IL_4V9F_096
Detailed Annotation
UAA/GAN with extra cWW
Broad Annotation
No text annotation
Motif group
IL_91079.1
Basepair signature
cWW-cWW-tWH-L-tHS-cWW
Number of instances in this motif group
8

Unit IDs

1K73|1|A|G|2772
1K73|1|A|G|2773
1K73|1|A|U|2774
1K73|1|A|A|2775
1K73|1|A|A|2776
1K73|1|A|G|2777
*
1K73|1|A|C|2797
1K73|1|A|G|2798
1K73|1|A|A|2799
1K73|1|A|A|2800
1K73|1|A|A|2801
1K73|1|A|C|2802

Current chains

Chain A
23S RRNA

Nearby chains

Chain G
RIBOSOMAL PROTEIN L6
Chain K
RIBOSOMAL PROTEIN L13

Coloring options:


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