IL_1K9M_100

3D structure

PDB id

1K9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal structure of tylosin bound to the 50S ribosomal subunit of Haloarcula marismortui

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGUUGCC*GC

Length

9 nucleotides

Bulged bases

1K9M|1|B|U|3023

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1K9M|1|B|G|3021
1K9M|1|B|G|3022
1K9M|1|B|U|3023
1K9M|1|B|U|3024
1K9M|1|B|G|3025
1K9M|1|B|C|3026
1K9M|1|B|C|3027
*
1K9M|1|B|G|3058
1K9M|1|B|C|3059

Current chains

Chain B

5S RRNA

Nearby chains

Chain F

RIBOSOMAL PROTEIN L5

Chain O

RIBOSOMAL PROTEIN L18