IL_1KC8_023
3D structure
- PDB id
- 1KC8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.01 Å
Loop
- Sequence
- CGCAG*CGAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1KC8_023 not in the Motif Atlas
- Homologous match to IL_4V9F_022
- Geometric discrepancy: 0.0368
- The information below is about IL_4V9F_022
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
1KC8|1|A|C|705
1KC8|1|A|G|706
1KC8|1|A|C|707
1KC8|1|A|A|708
1KC8|1|A|G|709
*
1KC8|1|A|C|719
1KC8|1|A|G|720
1KC8|1|A|A|721
1KC8|1|A|G|722
1KC8|1|A|G|723
Current chains
- Chain A
- 23S RRNA
Nearby chains
- Chain P
- RIBOSOMAL PROTEIN L18E
Coloring options: