IL_1M82_001
3D structure
- PDB id
- 1M82 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SOLUTION STRUCTURE OF THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS
- Experimental method
- SOLUTION NMR
- Resolution
Loop
- Sequence
- CAG*CUUG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1M82_001 not in the Motif Atlas
- Geometric match to IL_4V9F_003
- Geometric discrepancy: 0.3429
- The information below is about IL_4V9F_003
- Detailed Annotation
- Major groove platform with extra cWW
- Broad Annotation
- Major groove platform
- Motif group
- IL_51387.3
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 21
Unit IDs
1M82|1|A|C|6
1M82|1|A|A|7
1M82|1|A|G|8
*
1M82|1|A|C|17
1M82|1|A|U|18
1M82|1|A|U|19
1M82|1|A|G|20
Current chains
- Chain A
- RNA (25-MER): THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS
Nearby chains
No other chains within 10ÅColoring options: