IL_1M82_009

3D structure

PDB id

1M82 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SOLUTION STRUCTURE OF THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

CAG*CUUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1M82_009 not in the Motif Atlas

Geometric match to IL_8P9A_400

Geometric discrepancy: 0.367

The information below is about IL_8P9A_400

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_90351.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

1M82|9|A|C|6
1M82|9|A|A|7
1M82|9|A|G|8
*
1M82|9|A|C|17
1M82|9|A|U|18
1M82|9|A|U|19
1M82|9|A|G|20

Current chains

Chain A

RNA (25-MER): THE COMPLEMENTARY RNA PROMOTER OF INFLUENZA A VIRUS

Nearby chains