IL_1M90_084
3D structure
- PDB id
- 1M90 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Co-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GCAAG*CGACC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1M90_084 not in the Motif Atlas
- Homologous match to IL_4V9F_085
- Geometric discrepancy: 0.0374
- The information below is about IL_4V9F_085
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
1M90|1|A|G|2501
1M90|1|A|C|2502
1M90|1|A|A|2503
1M90|1|A|A|2504
1M90|1|A|G|2505
*
1M90|1|A|C|2515
1M90|1|A|G|2516
1M90|1|A|A|2517
1M90|1|A|C|2518
1M90|1|A|C|2519
Current chains
- Chain A
- 23S RRNA
Nearby chains
- Chain J
- RIBOSOMAL PROTEIN L10E
Coloring options: