IL_1N34_075
3D structure
- PDB id
- 1N34 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of codon and crystallographically disordered near-cognate transfer rna anticodon stem-loop mismatched at the first codon position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- CGGCCAACUCCGUGCCAG*CGGUAAUACGGAGG
- Length
- 32 nucleotides
- Bulged bases
- 1N34|1|A|A|532, 1N34|1|A|U|534
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1N34|1|A|C|504
1N34|1|A|G|505
1N34|1|A|G|506
1N34|1|A|C|507
1N34|1|A|C|508
1N34|1|A|A|509
1N34|1|A|A|510
1N34|1|A|C|511
1N34|1|A|U|512
1N34|1|A|C|513
1N34|1|A|C|514
1N34|1|A|G|515
1N34|1|A|U|516
1N34|1|A|G|517
1N34|1|A|C|518
1N34|1|A|C|519
1N34|1|A|A|520
1N34|1|A|G|521
*
1N34|1|A|C|528
1N34|1|A|G|529
1N34|1|A|G|530
1N34|1|A|U|531
1N34|1|A|A|532
1N34|1|A|A|533
1N34|1|A|U|534
1N34|1|A|A|535
1N34|1|A|C|536
1N34|1|A|G|537
1N34|1|A|G|538
1N34|1|A|A|539
1N34|1|A|G|540
1N34|1|A|G|541
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain C
- 30S RIBOSOMAL PROTEIN S3
- Chain D
- 30S RIBOSOMAL PROTEIN S4
- Chain E
- 30S RIBOSOMAL PROTEIN S5
- Chain L
- 30S RIBOSOMAL PROTEIN S12
- Chain Z
- A-SITE MESSENGER RNA FRAGMENT
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