IL_1OND_065

3D structure

PDB id

1OND (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TROLEANDOMYCIN MACROLIDE ANTIBIOTIC

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGGCG*CACAUGCC

Length

13 nucleotides

Bulged bases

1OND|1|0|C|1497, 1OND|1|0|U|1526

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1OND|1|0|G|1494
1OND|1|0|G|1495
1OND|1|0|G|1496
1OND|1|0|C|1497
1OND|1|0|G|1498
*
1OND|1|0|C|1522
1OND|1|0|A|1523
1OND|1|0|C|1524
1OND|1|0|A|1525
1OND|1|0|U|1526
1OND|1|0|G|1527
1OND|1|0|C|1528
1OND|1|0|C|1529

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains