IL_1OND_074

3D structure

PDB id

1OND (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TROLEANDOMYCIN MACROLIDE ANTIBIOTIC

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CUGCCAAC*GGACGUAUAG

Length

18 nucleotides

Bulged bases

1OND|1|0|C|1792, 1OND|1|0|C|1808, 1OND|1|0|U|1812

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1OND|1|0|C|1788
1OND|1|0|U|1789
1OND|1|0|G|1790
1OND|1|0|C|1791
1OND|1|0|C|1792
1OND|1|0|A|1793
1OND|1|0|A|1794
1OND|1|0|C|1795
*
1OND|1|0|G|1805
1OND|1|0|G|1806
1OND|1|0|A|1807
1OND|1|0|C|1808
1OND|1|0|G|1809
1OND|1|0|U|1810
1OND|1|0|A|1811
1OND|1|0|U|1812
1OND|1|0|A|1813
1OND|1|0|G|1814

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains