IL_1OND_093

3D structure

PDB id

1OND (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TROLEANDOMYCIN MACROLIDE ANTIBIOTIC

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGGGUUU*AAACUUG

Length

14 nucleotides

Bulged bases

1OND|1|0|A|2168

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1OND|1|0|C|2082
1OND|1|0|G|2083
1OND|1|0|G|2084
1OND|1|0|G|2085
1OND|1|0|U|2086
1OND|1|0|U|2087
1OND|1|0|U|2088
*
1OND|1|0|A|2167
1OND|1|0|A|2168
1OND|1|0|A|2169
1OND|1|0|C|2170
1OND|1|0|U|2171
1OND|1|0|U|2172
1OND|1|0|G|2173

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains