IL_1OND_135

3D structure

PDB id

1OND (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TROLEANDOMYCIN MACROLIDE ANTIBIOTIC

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UAAGGAACUUUG*CUGUCUCA

Length

20 nucleotides

Bulged bases

1OND|1|0|G|1684

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1OND|1|0|U|1680
1OND|1|0|A|1681
1OND|1|0|A|1682
1OND|1|0|G|1683
1OND|1|0|G|1684
1OND|1|0|A|1685
1OND|1|0|A|1686
1OND|1|0|C|1687
1OND|1|0|U|1688
1OND|1|0|U|1689
1OND|1|0|U|1690
1OND|1|0|G|1691
*
1OND|1|0|C|1973
1OND|1|0|U|1974
1OND|1|0|G|1975
1OND|1|0|U|1976
1OND|1|0|C|1977
1OND|1|0|U|1978
1OND|1|0|C|1979
1OND|1|0|A|1980

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains