IL_1OND_136

3D structure

PDB id

1OND (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TROLEANDOMYCIN MACROLIDE ANTIBIOTIC

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGUCAAGUGGAG*CGAAAUGAAGCC

Length

24 nucleotides

Bulged bases

1OND|1|0|G|1871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1OND|1|0|G|1841
1OND|1|0|G|1842
1OND|1|0|U|1843
1OND|1|0|C|1844
1OND|1|0|A|1845
1OND|1|0|A|1846
1OND|1|0|G|1847
1OND|1|0|U|1848
1OND|1|0|G|1849
1OND|1|0|G|1850
1OND|1|0|A|1851
1OND|1|0|G|1852
*
1OND|1|0|C|1865
1OND|1|0|G|1866
1OND|1|0|A|1867
1OND|1|0|A|1868
1OND|1|0|A|1869
1OND|1|0|U|1870
1OND|1|0|G|1871
1OND|1|0|A|1872
1OND|1|0|A|1873
1OND|1|0|G|1874
1OND|1|0|C|1875
1OND|1|0|C|1876

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains