IL_1Q7Y_031
3D structure
- PDB id
- 1Q7Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of CCdAP-Puromycin bound at the Peptidyl transferase center of the 50S ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGG*CCAUC
- Length
- 8 nucleotides
- Bulged bases
- 1Q7Y|1|A|G|869, 1Q7Y|1|A|C|881, 1Q7Y|1|A|A|882
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1Q7Y_031 not in the Motif Atlas
- Homologous match to IL_4V9F_030
- Geometric discrepancy: 0.1019
- The information below is about IL_4V9F_030
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_57881.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
1Q7Y|1|A|G|868
1Q7Y|1|A|G|869
1Q7Y|1|A|G|870
*
1Q7Y|1|A|C|880
1Q7Y|1|A|C|881
1Q7Y|1|A|A|882
1Q7Y|1|A|U|883
1Q7Y|1|A|C|884
Current chains
- Chain A
- 23S ribosomal rna
Nearby chains
- Chain 2
- 50S ribosomal protein L37e
- Chain C
- 50S ribosomal protein L2P
- Chain N
- L15 Ribosomal Protein
- Chain S
- 50S ribosomal protein L22P
Coloring options: