IL_1Q7Y_037

3D structure

PDB id

1Q7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of CCdAP-Puromycin bound at the Peptidyl transferase center of the 50S ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

AUUG*CUGU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1Q7Y_037 not in the Motif Atlas

Homologous match to IL_4V9F_036

Geometric discrepancy: 0.0601

The information below is about IL_4V9F_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02203.1

Basepair signature

cWW-cSW-cWW-cWW

Number of instances in this motif group

1

Unit IDs

1Q7Y|1|A|A|965
1Q7Y|1|A|U|966
1Q7Y|1|A|U|967
1Q7Y|1|A|G|968
*
1Q7Y|1|A|C|1000
1Q7Y|1|A|U|1001
1Q7Y|1|A|G|1002
1Q7Y|1|A|U|1003

Current chains

Chain A

23S ribosomal rna

Nearby chains

Chain J

L10 Ribosomal Protein