IL_1Q7Y_100

3D structure

PDB id

1Q7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of CCdAP-Puromycin bound at the Peptidyl transferase center of the 50S ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GGUUGCCU*AUAAGC

Length

14 nucleotides

Bulged bases

1Q7Y|1|B|U|3023, 1Q7Y|1|B|G|3025

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Q7Y|1|B|G|3021
1Q7Y|1|B|G|3022
1Q7Y|1|B|U|3023
1Q7Y|1|B|U|3024
1Q7Y|1|B|G|3025
1Q7Y|1|B|C|3026
1Q7Y|1|B|C|3027
1Q7Y|1|B|U|3028
*
1Q7Y|1|B|A|3054
1Q7Y|1|B|U|3055
1Q7Y|1|B|A|3056
1Q7Y|1|B|A|3057
1Q7Y|1|B|G|3058
1Q7Y|1|B|C|3059

Current chains

Chain B

5S ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L5P

Chain O

50S ribosomal protein L18P