IL_1Q86_097
3D structure
- PDB id
- 1Q86 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of CCA-Phe-cap-biotin bound simultaneously at half occupancy to both the A-site and P-site of the the 50S ribosomal Subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGUGCG*UUAAG
- Length
- 11 nucleotides
- Bulged bases
- 1Q86|1|A|A|2890
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1Q86_097 not in the Motif Atlas
- Homologous match to IL_4V9F_099
- Geometric discrepancy: 0.0591
- The information below is about IL_4V9F_099
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_70411.2
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
1Q86|1|A|U|2864
1Q86|1|A|G|2865
1Q86|1|A|U|2866
1Q86|1|A|G|2867
1Q86|1|A|C|2868
1Q86|1|A|G|2869
*
1Q86|1|A|U|2888
1Q86|1|A|U|2889
1Q86|1|A|A|2890
1Q86|1|A|A|2891
1Q86|1|A|G|2892
Current chains
- Chain A
- 23S ribosomal rna
Nearby chains
- Chain D
- 50S ribosomal protein L3P
- Chain V
- 50S ribosomal protein L24E
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