IL_1Q8N_033
3D structure
- PDB id
- 1Q8N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Solution Structure of the Malachite Green RNA Binding Aptamer
- Experimental method
- SOLUTION NMR
- Resolution
Loop
- Sequence
- GAC*GGUAAC
- Length
- 9 nucleotides
- Bulged bases
- 1Q8N|11|A|A|9
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1Q8N|11|A|G|8
1Q8N|11|A|A|9
1Q8N|11|A|C|10
*
1Q8N|11|A|G|23
1Q8N|11|A|G|24
1Q8N|11|A|U|25
1Q8N|11|A|A|26
1Q8N|11|A|A|27
1Q8N|11|A|C|28
Current chains
- Chain A
- RNA Aptamer
Nearby chains
No other chains within 10ÅColoring options: