IL_1Q96_001
3D structure
- PDB id
- 1Q96 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a mutant of the sarcin/ricin domain from rat 28S rRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.75 Å
Loop
- Sequence
- CUCAGUAU*AGAACCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.5
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
1Q96|1|A|C|6
1Q96|1|A|U|7
1Q96|1|A|C|8
1Q96|1|A|A|9
1Q96|1|A|G|10
1Q96|1|A|U|11
1Q96|1|A|A|12
1Q96|1|A|U|13
*
1Q96|1|A|A|18
1Q96|1|A|G|19
1Q96|1|A|A|20
1Q96|1|A|A|21
1Q96|1|A|C|22
1Q96|1|A|C|23
1Q96|1|A|G|24
Current chains
- Chain A
- sarcin/ricin 28S rRNA
Nearby chains
- Chain B
- sarcin/ricin 28S rRNA
- Chain C
- sarcin/ricin 28S rRNA
Coloring options: