IL_1QA6_002

3D structure

PDB id

1QA6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GAAA*UC

Length

6 nucleotides

Bulged bases

1QA6|1|C|A|138

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_39199.8

Basepair signature

cWW-tHS-cSH-cWW

Number of instances in this motif group

74

Unit IDs

1QA6|1|C|G|137
1QA6|1|C|A|138
1QA6|1|C|A|139
1QA6|1|C|A|140
*
1QA6|1|C|U|151
1QA6|1|C|C|152

Current chains

Chain C

58 NUCLEOTIDE RIBOSOMAL RNA DOMAIN

Nearby chains

Chain A

RIBOSOMAL PROTEIN L11