IL_1QZW_005

3D structure

PDB id

1QZW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the complete core of archaeal SRP and implications for inter-domain communication

Experimental method

X-RAY DIFFRACTION

Resolution

4.1 Å

Loop

Sequence

GGGAACCG*CGUGC

Length

13 nucleotides

Bulged bases

1QZW|1|F|C|190, 1QZW|1|F|C|191

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1QZW|1|F|G|185
1QZW|1|F|G|186
1QZW|1|F|G|187
1QZW|1|F|A|188
1QZW|1|F|A|189
1QZW|1|F|C|190
1QZW|1|F|C|191
1QZW|1|F|G|192
*
1QZW|1|F|C|215
1QZW|1|F|G|216
1QZW|1|F|U|217
1QZW|1|F|G|218
1QZW|1|F|C|219

Current chains

Chain F

7S RNA

Nearby chains

Chain E

Signal recognition 54 kDa protein