IL_1RY1_009

3D structure

PDB id

1RY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the signal recognition particle interacting with the elongation-arrested ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GAGGAU*AGACC

Length

11 nucleotides

Bulged bases

1RY1|1|M|G|58, 1RY1|1|M|A|59, 1RY1|1|N|G|288, 1RY1|1|N|A|289

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1RY1|1|M|G|55
1RY1|1|M|A|56
1RY1|1|M|G|57
1RY1|1|M|G|58
1RY1|1|M|A|59
1RY1|1|M|U|60
*
1RY1|1|N|A|287
1RY1|1|N|G|288
1RY1|1|N|A|289
1RY1|1|N|C|290
1RY1|1|N|C|291

Current chains

Chain M

SRP RNA

Chain N

SRP RNA

Nearby chains

Chain C

SRP9

Chain D

SRP14

Chain E

SRP Alu domain