IL_1S72_011

3D structure

PDB id

1S72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

CUCUCAUC*GUGCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_03110.1

Basepair signature

cWW-tSH-L-L-L-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

1S72|1|0|C|280
1S72|1|0|U|281
1S72|1|0|C|282
1S72|1|0|U|283
1S72|1|0|C|284
1S72|1|0|A|285
1S72|1|0|U|286
1S72|1|0|C|287
*
1S72|1|0|G|365
1S72|1|0|U|366
1S72|1|0|G|367
1S72|1|0|C|368
1S72|1|0|G|369

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L15e