IL_1S72_015
3D structure
- PDB id
- 1S72 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GUACC*GAGGCGAAAUAGAGC
- Length
- 20 nucleotides
- Bulged bases
- 1S72|1|0|U|510, 1S72|1|0|G|514
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_39324.1
- Basepair signature
- cWW-tSS-tHH-cSW-bif-tSH-tWH-R-R-tHS-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
1S72|1|0|G|487
1S72|1|0|U|488
1S72|1|0|A|489
1S72|1|0|C|490
1S72|1|0|C|491
*
1S72|1|0|G|501
1S72|1|0|A|502
1S72|1|0|G|503
1S72|1|0|G|504
1S72|1|0|C|505
1S72|1|0|G|506
1S72|1|0|A|507
1S72|1|0|A|508
1S72|1|0|A|509
1S72|1|0|U|510
1S72|1|0|A|511
1S72|1|0|G|512
1S72|1|0|A|513
1S72|1|0|G|514
1S72|1|0|C|515
Current chains
- Chain 0
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L39e
- Chain R
- 50S ribosomal protein L22P
- Chain T
- 50S ribosomal protein L24P
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