IL_1S72_036

3D structure

PDB id

1S72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

GCGACCG*CAAAC

Length

12 nucleotides

Bulged bases

1S72|1|0|G|960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_37914.3

Basepair signature

cWW-tWH-L-cWS-cWW-cWW

Number of instances in this motif group

2

Unit IDs

1S72|1|0|G|958
1S72|1|0|C|959
1S72|1|0|G|960
1S72|1|0|A|961
1S72|1|0|C|962
1S72|1|0|C|963
1S72|1|0|G|964
*
1S72|1|0|C|1004
1S72|1|0|A|1005
1S72|1|0|A|1006
1S72|1|0|A|1007
1S72|1|0|C|1008

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain 9

5S ribosomal RNA; 5S rRNA

Chain H

50S ribosomal protein L10e

Chain N

50S ribosomal protein L18P

Chain Q

50S ribosomal protein L21e