IL_1S72_049

3D structure

PDB id

1S72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

AUAGUAG*UGAACU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49493.8

Basepair signature

cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

18

Unit IDs

1S72|1|0|A|1367
1S72|1|0|U|1368
1S72|1|0|A|1369
1S72|1|0|G|1370
1S72|1|0|U|1371
1S72|1|0|A|1372
1S72|1|0|G|1373
*
1S72|1|0|U|2052
1S72|1|0|G|2053
1S72|1|0|A|2054
1S72|1|0|A|2055
1S72|1|0|C|2056
1S72|1|0|U|2057

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L4E

Chain R

50S ribosomal protein L22P