IL_1S72_051

3D structure

PDB id

1S72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

GCACU*AGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_73276.9

Basepair signature

cWW-tWH-cSH-L-cWS-cWW

Number of instances in this motif group

31

Unit IDs

1S72|1|0|G|1425
1S72|1|0|C|1426
1S72|1|0|A|1427
1S72|1|0|C|1428
1S72|1|0|U|1429
*
1S72|1|0|A|1437
1S72|1|0|G|1438
1S72|1|0|C|1439

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L39e

Chain P

50S ribosomal protein L19E

Chain R

50S ribosomal protein L22P