IL_1S72_057

3D structure

PDB id

1S72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

CCAACU*ACGAACG

Length

13 nucleotides

Bulged bases

1S72|1|0|C|1617

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80494.5

Basepair signature

cWW-tWH-L-R-tHS-bif-cWW

Number of instances in this motif group

2

Unit IDs

1S72|1|0|C|1578
1S72|1|0|C|1579
1S72|1|0|A|1580
1S72|1|0|A|1581
1S72|1|0|C|1582
1S72|1|0|U|1583
*
1S72|1|0|A|1612
1S72|1|0|C|1613
1S72|1|0|G|1614
1S72|1|0|A|1615
1S72|1|0|A|1616
1S72|1|0|C|1617
1S72|1|0|G|1618

Current chains

Chain 0

23S ribosomal RNA

Nearby chains