IL_1S72_100
3D structure
- PDB id
- 1S72 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GGUUGCCU*AUAAGC
- Length
- 14 nucleotides
- Bulged bases
- 1S72|1|9|U|23, 1S72|1|9|U|24
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58297.1
- Basepair signature
- cWW-bif-tSW-L-cWW-bif-tSW-R-cWW
- Number of instances in this motif group
- 1
Unit IDs
1S72|1|9|G|21
1S72|1|9|G|22
1S72|1|9|U|23
1S72|1|9|U|24
1S72|1|9|G|25
1S72|1|9|C|26
1S72|1|9|C|27
1S72|1|9|U|28
*
1S72|1|9|A|54
1S72|1|9|U|55
1S72|1|9|A|56
1S72|1|9|A|57
1S72|1|9|G|58
1S72|1|9|C|59
Current chains
- Chain 9
- 5S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L5P
- Chain N
- 50S ribosomal protein L18P
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