IL_1SM1_043

3D structure

PDB id

1SM1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRISTIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.42 Å

Loop

Sequence

CAUAGACAG*CGAG

Length

13 nucleotides

Bulged bases

1SM1|1|0|U|1056, 1SM1|1|0|A|1057, 1SM1|1|0|A|1122

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1SM1|1|0|C|1054
1SM1|1|0|A|1055
1SM1|1|0|U|1056
1SM1|1|0|A|1057
1SM1|1|0|G|1058
1SM1|1|0|A|1059
1SM1|1|0|C|1060
1SM1|1|0|A|1061
1SM1|1|0|G|1062
*
1SM1|1|0|C|1120
1SM1|1|0|G|1121
1SM1|1|0|A|1122
1SM1|1|0|G|1123

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain E

50S RIBOSOMAL PROTEIN L6