IL_1SM1_126
3D structure
- PDB id
- 1SM1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRISTIN
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.42 Å
Loop
- Sequence
- CAAUGAUAC*GAAAAGUCG
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1SM1|1|9|C|73
1SM1|1|9|A|74
1SM1|1|9|A|75
1SM1|1|9|U|76
1SM1|1|9|G|77
1SM1|1|9|A|78
1SM1|1|9|U|79
1SM1|1|9|A|80
1SM1|1|9|C|81
*
1SM1|1|9|G|100
1SM1|1|9|A|101
1SM1|1|9|A|102
1SM1|1|9|A|103
1SM1|1|9|A|104
1SM1|1|9|G|105
1SM1|1|9|U|106
1SM1|1|9|C|107
1SM1|1|9|G|108
Current chains
- Chain 9
- 5S RIBOSOMAL RNA
Nearby chains
- Chain 0
- Large subunit ribosomal RNA; LSU rRNA
- Chain K
- 50S RIBOSOMAL PROTEIN L16
- Chain T
- GENERAL STRESS PROTEIN CTC
Coloring options: