IL_1SM1_143

3D structure

PDB id

1SM1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH QUINUPRISTIN AND DALFOPRISTIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.42 Å

Loop

Sequence

CCGCUG*UAUG

Length

10 nucleotides

Bulged bases

1SM1|1|0|U|2706

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1SM1|1|0|C|2659
1SM1|1|0|C|2660
1SM1|1|0|G|2661
1SM1|1|0|C|2662
1SM1|1|0|U|2663
1SM1|1|0|G|2664
*
1SM1|1|0|U|2704
1SM1|1|0|A|2705
1SM1|1|0|U|2706
1SM1|1|0|G|2707

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain B

50S RIBOSOMAL PROTEIN L3

Chain I

50S RIBOSOMAL PROTEIN L14

Chain L

50S RIBOSOMAL PROTEIN L17

Chain N

50S RIBOSOMAL PROTEIN L19