IL_1U1Y_006
3D structure
- PDB id
- 1U1Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a complex between WT bacteriophage MS2 coat protein and an F5 aptamer RNA stemloop with 2aminopurine substituted at the-10 position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.85 Å
Loop
- Sequence
- GG(2PR)G*CAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 2PR
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1U1Y|1|S|G|103||||P_P
1U1Y|1|S|G|104||||P_P
1U1Y|1|S|2PR|105||||P_P
1U1Y|1|S|G|106||||P_P
*
1U1Y|1|S|C|113||||P_P
1U1Y|1|S|A|114||||P_P
1U1Y|1|S|C|115||||P_P
Current chains
- Chain S
- 5'-R(*CP*CP*GP*GP*(2PR)P*GP*GP*AP*UP*CP*AP*CP*CP*AP*CP*GP*G)-3'
Nearby chains
- Chain C
- Coat protein
Coloring options: