IL_1U6P_061

3D structure

PDB id

1U6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMR Structure of the MLV encapsidation signal bound to the Nucleocapsid protein

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

1U6P|15|B|U|319

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1U6P|15|B|G|318
1U6P|15|B|U|319
1U6P|15|B|G|320
*
1U6P|15|B|C|345
1U6P|15|B|C|346

Current chains

Chain B

101-MER

Nearby chains

Chain A

Gag polyprotein