IL_1VQO_072
3D structure
- PDB id
- 1VQO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of CCPMN bound to the large ribosomal subunit haloarcula marismortui
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.2 Å
Loop
- Sequence
- GGGG*UAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1VQO_072 not in the Motif Atlas
- Homologous match to IL_4V9F_072
- Geometric discrepancy: 0.0299
- The information below is about IL_4V9F_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_55516.2
- Basepair signature
- cWW-cWW-cSH-cWW
- Number of instances in this motif group
- 7
Unit IDs
1VQO|1|0|G|2090
1VQO|1|0|G|2091
1VQO|1|0|G|2092
1VQO|1|0|G|2093
*
1VQO|1|0|U|2652
1VQO|1|0|A|2653
1VQO|1|0|C|2654
Current chains
- Chain 0
- 23S ribosomal rna
Nearby chains
- Chain B
- 50S ribosomal protein L3P
- Chain J
- 50S ribosomal protein L13P
- Chain R
- 50S ribosomal protein L22P
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