IL_1VVJ_114

3D structure

PDB id

1VVJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.44 Å

Loop

Sequence

UAG*CAGG

Length

7 nucleotides

Bulged bases

1VVJ|1|RA|G|1559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1VVJ_114 not in the Motif Atlas

Homologous match to IL_7RQB_056

Geometric discrepancy: 0.2511

The information below is about IL_7RQB_056

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_54997.7

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

1VVJ|1|RA|U|1433
1VVJ|1|RA|A|1434
1VVJ|1|RA|G|1435
*
1VVJ|1|RA|C|1557
1VVJ|1|RA|A|1558
1VVJ|1|RA|G|1559
1VVJ|1|RA|G|1560

Current chains

Chain RA

23S rRNA

Nearby chains