IL_1VVJ_162

3D structure

PDB id

1VVJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.44 Å

Loop

Sequence

GUUUCC*GGUAGC

Length

12 nucleotides

Bulged bases

1VVJ|1|RA|U|2689, 1VVJ|1|RA|C|2690

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1VVJ|1|RA|G|2686
1VVJ|1|RA|U|2687
1VVJ|1|RA|U|2688
1VVJ|1|RA|U|2689
1VVJ|1|RA|C|2690
1VVJ|1|RA|C|2691
*
1VVJ|1|RA|G|2718
1VVJ|1|RA|G|2719
1VVJ|1|RA|U|2720
1VVJ|1|RA|A|2721
1VVJ|1|RA|G|2722
1VVJ|1|RA|C|2723

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RE

50S ribosomal protein L3

Chain RO

50S ribosomal protein L14

Chain RR

50S ribosomal protein L17

Chain RT

50S ribosomal protein L19