IL_1VVJ_207

3D structure

PDB id

1VVJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.44 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

1VVJ|1|XA|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1VVJ_207 not in the Motif Atlas

Homologous match to IL_4LFB_036

Geometric discrepancy: 0.1199

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

1VVJ|1|XA|G|925
1VVJ|1|XA|G|926
1VVJ|1|XA|G|927
*
1VVJ|1|XA|U|1390
1VVJ|1|XA|U|1391

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XX

A-site ASL SufA6