IL_1VW3_013

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAGUAU*AGAAAA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49493.8

Basepair signature

cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

18

Unit IDs

1VW3|1|A|U|279
1VW3|1|A|G|280
1VW3|1|A|A|281
1VW3|1|A|G|282
1VW3|1|A|U|283
1VW3|1|A|A|284
1VW3|1|A|U|285
*
1VW3|1|A|A|293
1VW3|1|A|G|294
1VW3|1|A|A|295
1VW3|1|A|A|296
1VW3|1|A|A|297
1VW3|1|A|A|298

Current chains

Chain A

21S ribosomal RNA

Nearby chains