IL_1VW3_021

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUAG*CAAAUC

Length

10 nucleotides

Bulged bases

1VW3|1|A|A|679, 1VW3|1|A|A|680, 1VW3|1|A|U|681

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_41516.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

1VW3|1|A|G|666
1VW3|1|A|U|667
1VW3|1|A|A|668
1VW3|1|A|G|669
*
1VW3|1|A|C|677
1VW3|1|A|A|678
1VW3|1|A|A|679
1VW3|1|A|A|680
1VW3|1|A|U|681
1VW3|1|A|C|682

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

54S ribosomal protein RML2, mitochondrial

Chain D

54S ribosomal protein YmL6, mitochondrial