IL_1VW3_036

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAUAAUA*UGUAUUAA

Length

16 nucleotides

Bulged bases

1VW3|1|A|U|1243, 1VW3|1|A|U|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_45432.1

Basepair signature

cWW-tSH-tHW-tWH-L-R-R-L-cWW

Number of instances in this motif group

1

Unit IDs

1VW3|1|A|U|1237
1VW3|1|A|G|1238
1VW3|1|A|A|1239
1VW3|1|A|U|1240
1VW3|1|A|A|1241
1VW3|1|A|A|1242
1VW3|1|A|U|1243
1VW3|1|A|A|1244
*
1VW3|1|A|U|1268
1VW3|1|A|G|1269
1VW3|1|A|U|1270
1VW3|1|A|A|1271
1VW3|1|A|U|1272
1VW3|1|A|U|1273
1VW3|1|A|A|1274
1VW3|1|A|A|1275

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain D

54S ribosomal protein YmL6, mitochondrial