IL_1VW3_051

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAUAAG*CAAUAAAG

Length

14 nucleotides

Bulged bases

1VW3|1|A|U|1652

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_06584.1

Basepair signature

cWW-cWW-L-R-R-tHW-bif-cWW

Number of instances in this motif group

4

Unit IDs

1VW3|1|A|C|1638
1VW3|1|A|A|1639
1VW3|1|A|U|1640
1VW3|1|A|A|1641
1VW3|1|A|A|1642
1VW3|1|A|G|1643
*
1VW3|1|A|C|1649
1VW3|1|A|A|1650
1VW3|1|A|A|1651
1VW3|1|A|U|1652
1VW3|1|A|A|1653
1VW3|1|A|A|1654
1VW3|1|A|A|1655
1VW3|1|A|G|1656

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

54S ribosomal protein RML2, mitochondrial