IL_1VW3_057

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUAUAAAU*AAUUAAAU

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25420.1

Basepair signature

cWW-tSH-tWH-tWH-L-R-R-L-L-tSH-cWW

Number of instances in this motif group

1

Unit IDs

1VW3|1|A|A|1757
1VW3|1|A|U|1758
1VW3|1|A|A|1759
1VW3|1|A|U|1760
1VW3|1|A|A|1761
1VW3|1|A|A|1762
1VW3|1|A|A|1763
1VW3|1|A|U|1764
*
1VW3|1|A|A|1786
1VW3|1|A|A|1787
1VW3|1|A|U|1788
1VW3|1|A|U|1789
1VW3|1|A|A|1790
1VW3|1|A|A|1791
1VW3|1|A|A|1792
1VW3|1|A|U|1793

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

54S ribosomal protein RML2, mitochondrial