IL_1VW3_101

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUAU*AUA

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1VW3_101 not in the Motif Atlas

Geometric match to IL_4N0T_004

Geometric discrepancy: 0.3329

The information below is about IL_4N0T_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32983.1

Basepair signature

cWW-L-cWW-cWW

Number of instances in this motif group

7

Unit IDs

1VW3|1|A|U|2005
1VW3|1|A|U|2006
1VW3|1|A|A|2007
1VW3|1|A|U|2008
*
1VW3|1|A|A|2079
1VW3|1|A|U|2080
1VW3|1|A|A|2081

Current chains

Chain A

21S ribosomal RNA

Nearby chains