IL_1W2B_028
3D structure
- PDB id
- 1W2B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Trigger Factor ribosome binding domain in complex with 50S
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- UGAAG*UGGAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1W2B_028 not in the Motif Atlas
- Geometric match to IL_4V9F_027
- Geometric discrepancy: 0.0737
- The information below is about IL_4V9F_027
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.1
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
1W2B|1|0|U|794
1W2B|1|0|G|795
1W2B|1|0|A|796
1W2B|1|0|A|797
1W2B|1|0|G|798
*
1W2B|1|0|U|815
1W2B|1|0|G|816
1W2B|1|0|G|817
1W2B|1|0|A|818
1W2B|1|0|A|819
Current chains
- Chain 0
- 23S RRNA
Nearby chains
- Chain A
- 50S RIBOSOMAL PROTEIN L2P
- Chain O
- 50S RIBOSOMAL PROTEIN L19E
- Chain Y
- 50S RIBOSOMAL PROTEIN L37AE
Coloring options: