IL_1XNR_042
3D structure
- PDB id
- 1XNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of an Inosine-Cytosine Wobble Base Pair in the Context of the Decoding Center
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CG*CUG
- Length
- 5 nucleotides
- Bulged bases
- 1XNR|1|A|U|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1XNR_042 not in the Motif Atlas
- Homologous match to IL_4LFB_046
- Geometric discrepancy: 0.2108
- The information below is about IL_4LFB_046
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_97561.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 147
Unit IDs
1XNR|1|A|C|1060
1XNR|1|A|G|1061
*
1XNR|1|A|C|1195
1XNR|1|A|U|1196
1XNR|1|A|G|1197
Current chains
- Chain A
- 16S Ribosomal RNA
Nearby chains
- Chain C
- 16S Ribosomal protein S3
- Chain E
- 16S Ribosomal protein S5
- Chain I
- 16S Ribosomal protein S9
- Chain J
- 16S Ribosomal protein S10
- Chain N
- 16S Ribosomal protein S14
- Chain W
- mRNA
- Chain X
- Anticodon tRNA
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