IL_1XNR_062
3D structure
- PDB id
- 1XNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of an Inosine-Cytosine Wobble Base Pair in the Context of the Decoding Center
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAAU*GGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1XNR_062 not in the Motif Atlas
- Homologous match to IL_4LFB_065
- Geometric discrepancy: 0.0571
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.1
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
1XNR|1|A|G|673
1XNR|1|A|G|674
1XNR|1|A|A|675
1XNR|1|A|A|676
1XNR|1|A|U|677
*
1XNR|1|A|G|713
1XNR|1|A|G|714
1XNR|1|A|A|715
1XNR|1|A|A|716
1XNR|1|A|C|717
Current chains
- Chain A
- 16S Ribosomal RNA
Nearby chains
- Chain F
- 16S Ribosomal protein S6
- Chain K
- 16S Ribosomal protein S11
- Chain R
- 16S Ribosomal protein S18
Coloring options: