3D structure

PDB id
1XNR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of an Inosine-Cytosine Wobble Base Pair in the Context of the Decoding Center
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
GUUGCCAGC*GGGCACUC
Length
17 nucleotides
Bulged bases
1XNR|1|A|U|1125, 1XNR|1|A|U|1126, 1XNR|1|A|C|1129
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1XNR|1|A|G|1124
1XNR|1|A|U|1125
1XNR|1|A|U|1126
1XNR|1|A|G|1127
1XNR|1|A|C|1128
1XNR|1|A|C|1129
1XNR|1|A|A|1130
1XNR|1|A|G|1131
1XNR|1|A|C|1132
*
1XNR|1|A|G|1142
1XNR|1|A|G|1143
1XNR|1|A|G|1144
1XNR|1|A|C|1145
1XNR|1|A|A|1146
1XNR|1|A|C|1147
1XNR|1|A|U|1148
1XNR|1|A|C|1149

Current chains

Chain A
16S Ribosomal RNA

Nearby chains

Chain I
16S Ribosomal protein S9
Chain J
16S Ribosomal protein S10

Coloring options:

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