IL_1Y69_039

3D structure

PDB id

1Y69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.33 Å

Loop

Sequence

CAUAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

1Y69|1|0|U|1056, 1Y69|1|0|A|1057, 1Y69|1|0|A|1122

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Y69|1|0|C|1054
1Y69|1|0|A|1055
1Y69|1|0|U|1056
1Y69|1|0|A|1057
1Y69|1|0|G|1058
1Y69|1|0|A|1059
1Y69|1|0|C|1060
1Y69|1|0|A|1061
1Y69|1|0|G|1062
1Y69|1|0|C|1063
*
1Y69|1|0|G|1118
1Y69|1|0|U|1119
1Y69|1|0|C|1120
1Y69|1|0|G|1121
1Y69|1|0|A|1122
1Y69|1|0|G|1123

Current chains

Chain 0

23S ribosomal RNA

Nearby chains