IL_1Y69_078

3D structure

PDB id

1Y69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.33 Å

Loop

Sequence

CCGU*ACGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CCGU,ACGG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Y69|1|0|C|1891
1Y69|1|0|C|1892
1Y69|1|0|G|1893
1Y69|1|0|U|1894
*
1Y69|1|0|A|1902
1Y69|1|0|C|1903
1Y69|1|0|G|1904
1Y69|1|0|G|1905

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain 8

Ribosome-recycling factor

Chain U

50S ribosomal protein L27