IL_1Y69_125

3D structure

PDB id

1Y69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.33 Å

Loop

Sequence

AUGUUGAC*GUUUAGU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Y69|1|0|A|856
1Y69|1|0|U|857
1Y69|1|0|G|858
1Y69|1|0|U|859
1Y69|1|0|U|860
1Y69|1|0|G|861
1Y69|1|0|A|862
1Y69|1|0|C|863
*
1Y69|1|0|G|940
1Y69|1|0|U|941
1Y69|1|0|U|942
1Y69|1|0|U|943
1Y69|1|0|A|944
1Y69|1|0|G|945
1Y69|1|0|U|946

Current chains

Chain 0

23S ribosomal RNA

Nearby chains